Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10950 and 10951 are separated by 102 nucleotides10951 and 10952 are separated by 239 nucleotides10952 and 10953 are separated by 738 nucleotides10953 and 10954 are separated by 93 nucleotides mRNA_2582: 10950 - HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034, at 494,471 to 495,097 10950 mRNA_2583: 10951 - K10610 DDB1 DNA damage-binding protein 1, at 495,200 to 499,404 10951 mRNA_2584: 10952 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 499,644 to 502,553 10952 mRNA_2585: 10953 - K18167 SDHAF1 succinate dehydrogenase assembly factor 1, at 503,292 to 503,677 10953 mRNA_2586: 10954 - K05765 CFL cofilin, at 503,771 to 504,788 10954
Group Condition mRNA_2582 mRNA_2583 mRNA_2584 mRNA_2585 mRNA_2586
10950 10951 10952 10953 10954
growth on oleic acid YNB Oleic Acid -0.6 -0.4 +0.2 -0.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 +0.3 -1.1 N.D.
auxotrophy Dropout Complete +0.0 -0.6 +0.2 -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.4 -0.0 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.6 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.3 -0.1 -0.8 N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.3 +0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.4 -0.1 -0.5 N.D.
growth on oleic acid YNB Glucose -0.1 -0.2 +0.2 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 -0.8 +0.3 +1.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.2 -1.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.4 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 -0.0 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 -0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.0 +0.3 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.0 -0.2 +0.3 N.D.
auxotrophy YNB Glucose +0.5 -0.3 +0.3 -0.1 N.D.
growth on ypd YPD -0.1 -0.0 +0.2 +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.2 +0.4 +0.4 N.D.
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