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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10956 and 10957 are separated by 949 nucleotides
10957 and 10958 are separated by 505 nucleotides
10958 and 10959 are separated by 404 nucleotides
10959 and 10960 are separated by 58 nucleotides
mRNA_2588: 10956 - K03246 EIF3I translation initiation factor 3 subunit I, at 545,209 to 547,043
10956
mRNA_2589: 10957 - Hypothetical Protein, at 547,993 to 548,642
10957
mRNA_2590: 10958 - Hypothetical Protein, at 549,148 to 549,789
10958
mRNA_2591: 10959 - Hypothetical Protein, at 550,194 to 551,919
10959
mRNA_2592: 10960 - HMMPfam-Protein of unknown function (DUF1762)-PF08574, at 551,978 to 553,842
10960
Group
Condition
mRNA
_2588
mRNA
_2589
mRNA
_2590
mRNA
_2591
mRNA
_2592
10956
10957
10958
10959
10960
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
-0.1
-0.5
-2.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
-0.2
+0.2
-1.8
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.0
+0.1
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
+0.1
+0.0
-1.5
auxotrophy
Dropout Complete
N.D.
+0.7
-0.1
-0.4
-1.4
growth on ypd
YPD
N.D.
+0.6
+0.0
-0.3
-1.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.0
-0.3
-0.8
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.1
-0.2
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
-0.1
-0.2
-0.6
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.0
-0.4
-0.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.8
+0.1
-0.2
-1.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.6
-0.0
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.5
+0.0
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.4
+0.0
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
-0.2
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.6
-0.1
+0.2
-0.9
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
-0.0
-0.1
+0.1
auxotrophy
YNB Glucose
N.D.
+0.7
+0.1
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
+0.1
+0.3
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.6
+0.0
+0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+0.1
+0.5
+1.2
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