Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10959 and 10960 are separated by 58 nucleotides10960 and 10961 are separated by 513 nucleotides10961 and 10962 are separated by 243 nucleotides10962 and 10963 are separated by 92 nucleotides mRNA_2591: 10959 - Hypothetical Protein, at 550,194 to 551,919 10959 mRNA_2592: 10960 - HMMPfam-Protein of unknown function (DUF1762)-PF08574, at 551,978 to 553,842 10960 mRNA_2593: 10961 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 554,356 to 555,895 10961 mRNA_2594: 10962 - K12200 PDCD6IP, ALIX, RIM20 programmed cell death 6-interacting protein, at 556,139 to 559,559 10962 mRNA_2595: 10963 - K14012 SHP1, UBX1, NSFL1C UBX domain-containing protein 1, at 559,652 to 561,565 10963
Group Condition mRNA_2591 mRNA_2592 mRNA_2593 mRNA_2594 mRNA_2595
10959 10960 10961 10962 10963
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -1.5 N.D. -0.6 -3.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.8 N.D. -0.2 -2.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -1.8 N.D. -0.9 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -2.0 N.D. +0.1 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.9 N.D. -0.8 -0.2
auxotrophy Dropout Complete -0.4 -1.4 N.D. +0.0 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. -1.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.4 N.D. -0.4 +0.7
growth on ypd YPD -0.3 -1.4 N.D. -0.0 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.6 N.D. +0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 N.D. -0.8 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 N.D. -0.5 -0.3
growth on oleic acid YNB Glucose -0.2 -0.9 N.D. +0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -1.2 N.D. +0.4 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.3 N.D. -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.6 N.D. +0.2 +1.0
auxotrophy YNB Glucose -0.1 -0.4 N.D. +0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 N.D. +0.1 +0.7
growth on oleic acid YNB Oleic Acid -0.1 +0.1 N.D. +0.3 +0.7
growth on ricinoleic acid YNB Glucose +0.3 +0.4 N.D. -0.1 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +1.2 N.D. +0.1 +0.8
remove
mRNA_2591
plot
remove
mRNA_2592
plot
remove
mRNA_2593
remove
mRNA_2594
plot
remove
mRNA_2595
plot