Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10960 and 10961 are separated by 513 nucleotides10961 and 10962 are separated by 243 nucleotides10962 and 10963 are separated by 92 nucleotides10963 and 10964 are separated by 149 nucleotides mRNA_2592: 10960 - HMMPfam-Protein of unknown function (DUF1762)-PF08574, at 551,978 to 553,842 10960 mRNA_2593: 10961 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 554,356 to 555,895 10961 mRNA_2594: 10962 - K12200 PDCD6IP, ALIX, RIM20 programmed cell death 6-interacting protein, at 556,139 to 559,559 10962 mRNA_2595: 10963 - K14012 SHP1, UBX1, NSFL1C UBX domain-containing protein 1, at 559,652 to 561,565 10963 mRNA_2596: 10964 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 561,715 to 563,654 10964
Group Condition mRNA_2592 mRNA_2593 mRNA_2594 mRNA_2595 mRNA_2596
10960 10961 10962 10963 10964
facs on lipid accumulation Sorted High BODIPY Gate -1.5 N.D. -0.6 -3.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 N.D. -0.2 -2.0 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.8 N.D. -0.9 +0.0 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -2.0 N.D. +0.1 +0.6 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 N.D. -0.8 -0.2 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.5 -0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 N.D. -0.4 +0.7 +0.3
auxotrophy Dropout Complete -1.4 N.D. +0.0 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -1.0 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. +0.0 -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.8 -0.5 +0.6
growth on ypd YPD -1.4 N.D. -0.0 +0.7 +0.3
growth on oleic acid YNB Glucose -0.9 N.D. +0.2 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -1.2 N.D. +0.4 +0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.1 +0.2 +0.3
auxotrophy YNB Glucose -0.4 N.D. +0.2 +0.6 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. +0.2 +1.0 +0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.3 +0.7 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.7 +0.2
growth on ricinoleic acid YNB Glucose +0.4 N.D. -0.1 +0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +1.2 N.D. +0.1 +0.8 +0.5
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