Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10961 and 10962 are separated by 243 nucleotides10962 and 10963 are separated by 92 nucleotides10963 and 10964 are separated by 149 nucleotides10964 and 10965 are separated by 449 nucleotides mRNA_2593: 10961 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 554,356 to 555,895 10961 mRNA_2594: 10962 - K12200 PDCD6IP, ALIX, RIM20 programmed cell death 6-interacting protein, at 556,139 to 559,559 10962 mRNA_2595: 10963 - K14012 SHP1, UBX1, NSFL1C UBX domain-containing protein 1, at 559,652 to 561,565 10963 mRNA_2596: 10964 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 561,715 to 563,654 10964 mRNA_2597: 10965 - Hypothetical Protein, at 564,104 to 565,284 10965
Group Condition mRNA_2593 mRNA_2594 mRNA_2595 mRNA_2596 mRNA_2597
10961 10962 10963 10964 10965
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.6 -3.2 -0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -2.0 -0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.8 -0.5 +0.6 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.5 -0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -1.0 +0.2 +0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.6 -0.6 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.9 +0.0 +0.7 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.8 -0.2 +0.6 +0.3
auxotrophy Dropout Complete N.D. +0.0 +0.5 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 -0.2 +0.1 +0.2
growth on oleic acid YNB Glucose N.D. +0.2 +0.3 +0.1 -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.7 +0.1 -0.3
growth on oleic acid YNB Oleic Acid N.D. +0.3 +0.7 -0.1 -0.4
auxotrophy YNB Glucose N.D. +0.2 +0.6 +0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.2 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.8 +0.5 -0.6
growth on ypd YPD N.D. -0.0 +0.7 +0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.4 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 +0.7 +0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +1.0 +0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.7 +0.2 +0.2
remove
mRNA_2593
plot
remove
mRNA_2594
plot
remove
mRNA_2595
remove
mRNA_2596
plot
remove
mRNA_2597
plot