Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10962 and 10963 are separated by 92 nucleotides10963 and 10964 are separated by 149 nucleotides10964 and 10965 are separated by 449 nucleotides10965 and 10966 are separated by 899 nucleotides mRNA_2594: 10962 - K12200 PDCD6IP, ALIX, RIM20 programmed cell death 6-interacting protein, at 556,139 to 559,559 10962 mRNA_2595: 10963 - K14012 SHP1, UBX1, NSFL1C UBX domain-containing protein 1, at 559,652 to 561,565 10963 mRNA_2596: 10964 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 561,715 to 563,654 10964 mRNA_2597: 10965 - Hypothetical Protein, at 564,104 to 565,284 10965 mRNA_2598: 10966 - Hypothetical Protein, at 566,184 to 566,984 10966
Group Condition mRNA_2594 mRNA_2595 mRNA_2596 mRNA_2597 mRNA_2598
10962 10963 10964 10965 10966
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -3.2 -0.0 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -2.0 -0.4 -0.2 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.5 +0.6 -0.4 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.3 +0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 +0.2 +0.4 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 +0.0 +0.7 +0.0 -0.2
growth on oleic acid YNB Glucose +0.2 +0.3 +0.1 -0.4 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 -0.2 +0.6 +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.8 +0.5 -0.6 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.2 +0.1 +0.2 +0.1
auxotrophy Dropout Complete +0.0 +0.5 +0.0 -0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.6 -0.6 -0.4 +0.5
growth on oleic acid YNB Oleic Acid +0.3 +0.7 -0.1 -0.4 -0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.7 +0.1 -0.3 -0.1
auxotrophy YNB Glucose +0.2 +0.6 +0.0 -0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.3 +0.2 +0.1
growth on ypd YPD -0.0 +0.7 +0.3 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.4 +0.2 -0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +1.0 +0.3 -0.3 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.7 +0.3 +0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.7 +0.2 +0.2 +0.1
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