Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10963 and 10964 are separated by 149 nucleotides10964 and 10965 are separated by 449 nucleotides10965 and 10966 are separated by 899 nucleotides10966 and 10967 are separated by 556 nucleotides mRNA_2595: 10963 - K14012 SHP1, UBX1, NSFL1C UBX domain-containing protein 1, at 559,652 to 561,565 10963 mRNA_2596: 10964 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 561,715 to 563,654 10964 mRNA_2597: 10965 - Hypothetical Protein, at 564,104 to 565,284 10965 mRNA_2598: 10966 - Hypothetical Protein, at 566,184 to 566,984 10966 mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567,541 to 568,045 10967
Group Condition mRNA_2595 mRNA_2596 mRNA_2597 mRNA_2598 mRNA_2599
10963 10964 10965 10966 10967
facs on lipid accumulation Sorted No BODIPY Gate -2.0 -0.4 -0.2 +0.4 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -3.2 -0.0 -0.4 +0.2 +1.0
auxotrophy Dropout Complete +0.5 +0.0 -0.5 +0.1 -2.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.6 -0.4 -0.4 -1.2
auxotrophy YNB Glucose 75mM Arginine +1.0 +0.3 -0.3 +0.0 -2.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 +0.5 -0.6 -0.7 -0.9
auxotrophy YNB Glucose +0.6 +0.0 -0.3 +0.1 -1.3
growth on oleic acid YNB Oleic Acid +0.7 -0.1 -0.4 -0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 +0.1 -0.1 -0.4
growth on oleic acid YNB Glucose +0.3 +0.1 -0.4 -0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 -0.1 +0.3 -1.2
growth on ricinoleic acid YNB Glucose +0.7 +0.1 -0.3 -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.6 -0.4 +0.5 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.3 +0.4 +0.2 -1.6
ypd buoyancy 40 hrs Median Buoyancy +0.7 +0.2 +0.2 +0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.4 -0.0 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.6 +0.3 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 +0.2 +0.1 +0.7
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.3 +0.2 +0.1 +0.1
growth on ypd YPD +0.7 +0.3 -0.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.7 +0.0 -0.2 +0.9
remove
mRNA_2595
plot
remove
mRNA_2596
plot
remove
mRNA_2597
remove
mRNA_2598
plot
remove
mRNA_2599
plot