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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10965 and 10966 are separated by 899 nucleotides
10966 and 10967 are separated by 556 nucleotides
10967 and 10968 are separated by 848 nucleotides
10968 and 10969 are separated by 219 nucleotides
mRNA_2597: 10965 - Hypothetical Protein, at 564,104 to 565,284
10965
mRNA_2598: 10966 - Hypothetical Protein, at 566,184 to 566,984
10966
mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567,541 to 568,045
10967
mRNA_2600: 10968 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 568,894 to 570,450
10968
mRNA_2601: 10969 - Hypothetical Protein, at 570,670 to 572,190
10969
Group
Condition
mRNA
_2597
mRNA
_2598
mRNA
_2599
mRNA
_2600
mRNA
_2601
10965
10966
10967
10968
10969
auxotrophy
Dropout Complete
-0.5
+0.1
-2.3
-0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.0
-2.3
-0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.4
-1.2
-0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.7
-0.9
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.4
-0.2
-0.6
-0.0
-0.2
auxotrophy
YNB Glucose
-0.3
+0.1
-1.3
-0.0
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.2
-1.6
-0.4
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-0.6
-0.2
+0.0
growth on oleic acid
YNB Glucose
-0.4
-0.5
+0.0
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
-1.2
+0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
-0.4
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.1
-0.8
+0.0
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.4
-0.5
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.1
+0.2
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
-0.0
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.5
-0.2
-0.6
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
+0.1
+0.2
+0.0
growth on ypd
YPD
-0.2
+0.1
+0.4
+0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.2
+1.0
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.2
+0.9
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.1
+0.7
+0.3
+0.2
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