Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10970 and 10971 are separated by 469 nucleotides
10971 and 10972 are separated by 29 nucleotides
10972 and 10973 are separated by 124 nucleotides
10973 and 10974 are separated by 682 nucleotides
mRNA_2602: 10970 - HMMPfam-Glycosyltransferase family 10 (fucosyltransferase)-PF00852,SUPERFAMILY--SSF53756, at 572,350 to 572,862
10970
mRNA_2603: 10971 - Hypothetical Protein, at 573,332 to 575,202
10971
mRNA_2604: 10972 - BLAST Esterase, SGNH hydrolase-type domain protein [Rho..., at 575,232 to 576,935
10972
mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577,060 to 580,725
10973
mRNA_2606: 10974 - Hypothetical Protein, at 581,408 to 582,467
10974
Group
Condition
mRNA
_2602
mRNA
_2603
mRNA
_2604
mRNA
_2605
mRNA
_2606
10970
10971
10972
10973
10974
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.5
-0.2
-0.4
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.0
-0.1
-0.1
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.3
+0.2
-0.8
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
-0.1
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.2
+0.2
+0.3
growth on ypd
YPD
-0.0
+0.2
+0.2
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
+0.0
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.0
+0.2
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.0
+0.0
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
+0.1
-0.1
-0.0
growth on oleic acid
YNB Glucose
+0.2
+0.0
+0.2
+0.1
-0.2
auxotrophy
Dropout Complete
-0.1
+0.2
+0.3
+0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.3
+0.2
+0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.2
+0.1
+0.5
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.3
+0.7
+0.0
+0.3
auxotrophy
YNB Glucose
+0.0
+0.2
+0.2
+0.3
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.2
+0.2
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
+0.4
+0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.1
+0.5
-0.2
+0.4
growth on ricinoleic acid
YNB Glucose
+0.4
-0.2
+0.5
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.2
+0.6
+0.2
+0.0
remove
mRNA_2602
plot
remove
mRNA_2603
plot
remove
mRNA_2604
remove
mRNA_2605
plot
remove
mRNA_2606
plot