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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10972 and 10973 are separated by 124 nucleotides
10973 and 10974 are separated by 682 nucleotides
10974 and 10975 are separated by 289 nucleotides
10975 and 10976 are separated by 1099 nucleotides
mRNA_2604: 10972 - BLAST Esterase, SGNH hydrolase-type domain protein [Rho..., at 575,232 to 576,935
10972
mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577,060 to 580,725
10973
mRNA_2606: 10974 - Hypothetical Protein, at 581,408 to 582,467
10974
mRNA_2607: 10975 - KOG4102 Uncharacterized conserved protein, at 582,757 to 583,405
10975
mRNA_2608: 10976 - Hypothetical Protein, at 584,505 to 585,992
10976
Group
Condition
mRNA
_2604
mRNA
_2605
mRNA
_2606
mRNA
_2607
mRNA
_2608
10972
10973
10974
10975
10976
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.5
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.8
-0.0
N.D.
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.4
+0.3
N.D.
+0.1
auxotrophy
Dropout Complete
+0.3
+0.0
-0.0
N.D.
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.7
+0.0
+0.3
N.D.
-1.1
growth on oleic acid
YNB Glucose
+0.2
+0.1
-0.2
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
-0.1
N.D.
-0.1
growth on ypd
YPD
+0.2
-0.0
-0.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.0
+0.3
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.0
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.0
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.0
-0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.1
+0.2
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.2
+0.3
N.D.
-0.0
auxotrophy
YNB Glucose
+0.2
+0.3
+0.0
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.5
+0.2
N.D.
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.5
-0.0
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.6
+0.2
+0.0
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.2
+0.4
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
+0.5
+0.3
+0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.1
+0.3
N.D.
+0.2
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