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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10974 and 10975 are separated by 289 nucleotides
10975 and 10976 are separated by 1099 nucleotides
10976 and 10977 are separated by 2979 nucleotides
10977 and 10978 are separated by 139 nucleotides
mRNA_2606: 10974 - Hypothetical Protein, at 581,408 to 582,467
10974
mRNA_2607: 10975 - KOG4102 Uncharacterized conserved protein, at 582,757 to 583,405
10975
mRNA_2608: 10976 - Hypothetical Protein, at 584,505 to 585,992
10976
mRNA_2609: 10977 - Hypothetical Protein, at 588,972 to 589,930
10977
mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590,070 to 590,802
10978
Group
Condition
mRNA
_2606
mRNA
_2607
mRNA
_2608
mRNA
_2609
mRNA
_2610
10974
10975
10976
10977
10978
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
N.D.
-1.1
-0.6
-0.1
auxotrophy
Dropout Complete
-0.0
N.D.
-0.5
+0.1
-0.4
growth on oleic acid
YNB Glucose
-0.2
N.D.
-0.1
-0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.5
N.D.
+0.1
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
-0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
N.D.
-0.1
+0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.1
-0.6
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
+0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
-0.4
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
N.D.
-0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
+0.0
+0.1
-0.3
auxotrophy
YNB Glucose
+0.0
N.D.
-0.2
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.0
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
-0.0
N.D.
+0.0
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.1
+0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
N.D.
+0.1
+0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
N.D.
+0.4
+0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
N.D.
+0.0
+0.1
-0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
-0.0
+0.2
-0.0
growth on ypd
YPD
-0.3
N.D.
+0.2
+0.0
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
+0.2
+0.3
+0.1
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