Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10974 and 10975 are separated by 289 nucleotides10975 and 10976 are separated by 1099 nucleotides10976 and 10977 are separated by 2979 nucleotides10977 and 10978 are separated by 139 nucleotides mRNA_2606: 10974 - Hypothetical Protein, at 581,408 to 582,467 10974 mRNA_2607: 10975 - KOG4102 Uncharacterized conserved protein, at 582,757 to 583,405 10975 mRNA_2608: 10976 - Hypothetical Protein, at 584,505 to 585,992 10976 mRNA_2609: 10977 - Hypothetical Protein, at 588,972 to 589,930 10977 mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590,070 to 590,802 10978
Group Condition mRNA_2606 mRNA_2607 mRNA_2608 mRNA_2609 mRNA_2610
10974 10975 10976 10977 10978
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -1.1 -0.6 -0.1
auxotrophy Dropout Complete -0.0 N.D. -0.5 +0.1 -0.4
growth on oleic acid YNB Glucose -0.2 N.D. -0.1 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.5 N.D. +0.1 -0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. -0.1 +0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. +0.1 -0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.0 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. -0.2 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.0 +0.1 -0.3
auxotrophy YNB Glucose +0.0 N.D. -0.2 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.0 -0.3 +0.1
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.0 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.1 +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. +0.1 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.4 +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.0 +0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.0 +0.2 -0.0
growth on ypd YPD -0.3 N.D. +0.2 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.2 +0.3 +0.1
remove
mRNA_2606
plot
remove
mRNA_2607
plot
remove
mRNA_2608
remove
mRNA_2609
plot
remove
mRNA_2610
plot