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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10975 and 10976 are separated by 1099 nucleotides
10976 and 10977 are separated by 2979 nucleotides
10977 and 10978 are separated by 139 nucleotides
10978 and 10979 are separated by 494 nucleotides
mRNA_2607: 10975 - KOG4102 Uncharacterized conserved protein, at 582,757 to 583,405
10975
mRNA_2608: 10976 - Hypothetical Protein, at 584,505 to 585,992
10976
mRNA_2609: 10977 - Hypothetical Protein, at 588,972 to 589,930
10977
mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590,070 to 590,802
10978
mRNA_2611: 10979 - BLAST phosphatase iiic [Colletotrichum gloeosporioides ..., at 591,297 to 591,714
10979
Group
Condition
mRNA
_2607
mRNA
_2608
mRNA
_2609
mRNA
_2610
mRNA
_2611
10975
10976
10977
10978
10979
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-1.1
-0.6
-0.1
-0.1
auxotrophy
Dropout Complete
N.D.
-0.5
+0.1
-0.4
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.6
-0.1
-0.6
growth on oleic acid
YNB Glucose
N.D.
-0.1
-0.1
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.4
-0.1
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.0
+0.2
-0.0
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.2
-0.0
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.3
+0.1
-0.1
auxotrophy
YNB Glucose
N.D.
-0.2
+0.5
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.0
+0.2
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
+0.1
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.1
-0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.2
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
+0.1
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
+0.1
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
-0.0
-0.2
+0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.3
+0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.4
+0.2
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
+0.3
+0.1
-0.0
growth on ypd
YPD
N.D.
+0.2
+0.0
+0.5
+0.2
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