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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10976 and 10977 are separated by 2979 nucleotides
10977 and 10978 are separated by 139 nucleotides
10978 and 10979 are separated by 494 nucleotides
10979 and 10980 are separated by 127 nucleotides
mRNA_2608: 10976 - Hypothetical Protein, at 584,505 to 585,992
10976
mRNA_2609: 10977 - Hypothetical Protein, at 588,972 to 589,930
10977
mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590,070 to 590,802
10978
mRNA_2611: 10979 - BLAST phosphatase iiic [Colletotrichum gloeosporioides ..., at 591,297 to 591,714
10979
mRNA_2612: 10980 - HMMPfam-Protein kinase C terminal domain-PF00433, at 591,842 to 594,740
10980
Group
Condition
mRNA
_2608
mRNA
_2609
mRNA
_2610
mRNA
_2611
mRNA
_2612
10976
10977
10978
10979
10980
facs on lipid accumulation
Sorted High BODIPY Gate
-1.1
-0.6
-0.1
-0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.6
-0.1
-0.6
-0.2
auxotrophy
Dropout Complete
-0.5
+0.1
-0.4
-0.5
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.3
-0.4
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
+0.2
-0.0
-0.6
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.1
+0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
+0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
-0.0
-0.7
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.2
-0.0
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
-0.3
+0.1
-0.3
growth on oleic acid
YNB Oleic Acid
+0.0
+0.2
-0.1
-0.3
-0.1
auxotrophy
YNB Glucose
-0.2
+0.5
-0.2
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.1
+0.2
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.0
-0.2
+0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.1
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
-0.4
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
-0.2
+0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.3
+0.1
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.2
-0.3
-0.1
+0.1
growth on ypd
YPD
+0.2
+0.0
+0.5
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.3
+0.1
-0.0
+0.1
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