Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10977 and 10978 are separated by 139 nucleotides10978 and 10979 are separated by 494 nucleotides10979 and 10980 are separated by 127 nucleotides10980 and 10981 are separated by 239 nucleotides mRNA_2609: 10977 - Hypothetical Protein, at 588,972 to 589,930 10977 mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590,070 to 590,802 10978 mRNA_2611: 10979 - BLAST phosphatase iiic [Colletotrichum gloeosporioides ..., at 591,297 to 591,714 10979 mRNA_2612: 10980 - HMMPfam-Protein kinase C terminal domain-PF00433, at 591,842 to 594,740 10980 mRNA_2613: 10981 - K00223 ERG4 Delta24(24(1))-sterol reductase, at 594,980 to 596,945 10981
Group Condition mRNA_2609 mRNA_2610 mRNA_2611 mRNA_2612 mRNA_2613
10977 10978 10979 10980 10981
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 -0.6 -0.2 N.D.
growth on oleic acid YNB Glucose -0.1 -0.3 -0.4 -0.2 N.D.
auxotrophy Dropout Complete +0.1 -0.4 -0.5 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.0 -0.6 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 -0.7 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.1 -0.1 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.1 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 +0.1 -0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.1 -0.3 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +0.1 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.3 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 +0.0 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 +0.3 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.3 +0.0 N.D.
auxotrophy YNB Glucose +0.5 -0.2 -0.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 +0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 +0.5 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 -0.0 +0.1 N.D.
growth on ypd YPD +0.0 +0.5 +0.2 -0.1 N.D.
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