Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10982 and 10983 are separated by 935 nucleotides10983 and 10984 are separated by 448 nucleotides10984 and 10985 are separated by 486 nucleotides10985 and 10986 are separated by 101 nucleotides mRNA_2614: 10982 - K18050 PRKCE novel protein kinase C epsilon type, at 597,517 to 601,558 10982 mRNA_2615: 10983 - K14775 UTP30, RSL1D1 ribosome biogenesis protein UTP30, at 602,494 to 603,879 10983 mRNA_2616: 10984 - KOG4076 Regulator of ATP-sensitive K+ channels Alpha-endosulfine/ARPP-19 and related cAMP-regulated phosphoproteins, at 604,328 to 604,979 10984 mRNA_2617: 10985 - HMMPfam-Carbonic anhydrase-PF00484,SMART-Carbonic anhydrase-SM00947,SUPERFAMILY--SSF53056, at 605,466 to 606,411 10985 mRNA_2618: 10986 - Hypothetical Protein, at 606,513 to 607,761 10986
Group Condition mRNA_2614 mRNA_2615 mRNA_2616 mRNA_2617 mRNA_2618
10982 10983 10984 10985 10986
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -4.3 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. -3.3 -0.2 N.D.
auxotrophy Dropout Complete -3.2 N.D. -0.8 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -3.1 N.D. -0.4 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. -4.0 +0.9 N.D.
auxotrophy YNB Glucose -3.2 N.D. -0.4 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -3.2 N.D. -0.3 +0.3 N.D.
growth on oleic acid YNB Glucose -2.8 N.D. +0.5 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 N.D. -2.4 +1.5 N.D.
growth on oleic acid YNB Oleic Acid -2.2 N.D. +0.9 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 N.D. -0.5 +0.4 N.D.
growth on ypd YPD +0.2 N.D. -0.5 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. -0.2 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 N.D. -0.4 -0.8 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 N.D. +0.5 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. +0.2 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -1.1 N.D. +0.5 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 N.D. -0.0 +0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -1.0 N.D. +0.3 +0.7 N.D.
growth on ricinoleic acid YNB Glucose -1.0 N.D. +1.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. +0.1 +0.2 N.D.
remove
mRNA_2614
plot		 remove
mRNA_2615
plot		 remove
mRNA_2616		 remove
mRNA_2617
plot		 remove
mRNA_2618
plot