Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10992 and 10993 are separated by 361 nucleotides
10993 and 10994 are separated by 283 nucleotides
10994 and 10995 are separated by 928 nucleotides
10995 and 10996 are separated by 627 nucleotides
mRNA_2624: 10992 - SUPERFAMILY--SSF52058, at 616,981 to 618,073
10992
mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618,435 to 621,494
10993
mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621,778 to 623,321
10994
mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624,250 to 625,308
10995
mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625,936 to 628,159
10996
Group
Condition
mRNA
_2624
mRNA
_2625
mRNA
_2626
mRNA
_2627
mRNA
_2628
10992
10993
10994
10995
10996
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.3
-0.5
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.2
-0.7
+0.0
-0.2
auxotrophy
Dropout Complete
-0.1
-0.0
+0.1
-0.5
-0.2
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.0
-0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.0
-0.2
-0.5
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.3
+0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.4
-0.2
+0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.2
-0.2
+0.3
+0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-0.1
+0.1
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.5
-0.2
+0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
-0.0
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.1
+0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
-0.1
+0.4
-0.2
auxotrophy
YNB Glucose
+0.1
-0.0
+0.3
+0.0
-0.4
growth on ricinoleic acid
YNB Glucose
+0.2
+0.2
-0.0
-0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.4
+0.2
-0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.0
-0.1
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
+0.1
+0.3
+0.0
growth on ypd
YPD
+0.0
+0.0
+0.1
+0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.2
-0.2
-0.2
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.1
-0.3
+0.3
+0.5
remove
mRNA_2624
plot
remove
mRNA_2625
plot
remove
mRNA_2626
remove
mRNA_2627
plot
remove
mRNA_2628
plot