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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10993 and 10994 are separated by 283 nucleotides
10994 and 10995 are separated by 928 nucleotides
10995 and 10996 are separated by 627 nucleotides
10996 and 10997 are separated by 405 nucleotides
mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618,435 to 621,494
10993
mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621,778 to 623,321
10994
mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624,250 to 625,308
10995
mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625,936 to 628,159
10996
mRNA_2629: 10997 - Hypothetical Protein, at 628,565 to 629,191
10997
Group
Condition
mRNA
_2625
mRNA
_2626
mRNA
_2627
mRNA
_2628
mRNA
_2629
10993
10994
10995
10996
10997
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.7
+0.0
-0.2
-0.1
auxotrophy
Dropout Complete
-0.0
+0.1
-0.5
-0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.5
-0.2
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
-0.2
-0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.2
+0.0
-0.2
+0.1
auxotrophy
YNB Glucose
-0.0
+0.3
+0.0
-0.4
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
-0.6
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
+0.1
-0.3
+0.0
growth on ypd
YPD
+0.0
+0.1
+0.4
-0.2
-0.7
growth on oleic acid
YNB Glucose
+0.1
-0.0
-0.4
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
+0.4
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.2
+0.4
-0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
+0.1
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.2
-0.5
+0.0
+0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.2
-0.5
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.1
+0.1
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.2
+0.3
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
+0.2
-0.0
-0.4
+0.0
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.1
+0.3
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.3
+0.3
+0.5
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.2
-0.2
+0.5
+0.5
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