Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10993 and 10994 are separated by 283 nucleotides10994 and 10995 are separated by 928 nucleotides10995 and 10996 are separated by 627 nucleotides10996 and 10997 are separated by 405 nucleotides mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618,435 to 621,494 10993 mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621,778 to 623,321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624,250 to 625,308 10995 mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625,936 to 628,159 10996 mRNA_2629: 10997 - Hypothetical Protein, at 628,565 to 629,191 10997
Group Condition mRNA_2625 mRNA_2626 mRNA_2627 mRNA_2628 mRNA_2629
10993 10994 10995 10996 10997
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.7 +0.0 -0.2 -0.1
auxotrophy Dropout Complete -0.0 +0.1 -0.5 -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.5 -0.2 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.2 -0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 +0.0 -0.2 +0.1
auxotrophy YNB Glucose -0.0 +0.3 +0.0 -0.4 -0.4
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.6 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 +0.1 -0.3 +0.0
growth on ypd YPD +0.0 +0.1 +0.4 -0.2 -0.7
growth on oleic acid YNB Glucose +0.1 -0.0 -0.4 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 +0.4 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.2 +0.4 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.1 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.2 -0.5 +0.0 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 -0.5 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 +0.1 +0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 +0.3 +0.0 +0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.0 -0.4 +0.0 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 +0.3 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 +0.3 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.2 -0.2 +0.5 +0.5
remove
mRNA_2625
plot
remove
mRNA_2626
plot
remove
mRNA_2627
remove
mRNA_2628
plot
remove
mRNA_2629
plot