Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10998 and 10999 are separated by 476 nucleotides10999 and 11000 are separated by 1277 nucleotides11000 and 11001 are separated by 127 nucleotides11001 and 11002 are separated by 313 nucleotides mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629,452 to 632,288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632,765 to 634,825 10999 mRNA_2632: 11000 - Hypothetical Protein, at 636,103 to 638,450 11000 mRNA_2633: 11001 - HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784, at 638,578 to 641,420 11001 mRNA_2634: 11002 - KOG2234 Predicted UDP-galactose transporter, at 641,734 to 644,523 11002
Group Condition mRNA_2630 mRNA_2631 mRNA_2632 mRNA_2633 mRNA_2634
10998 10999 11000 11001 11002
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -1.5 +0.1 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -1.4 +0.3 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -1.2 -0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.9 -0.0 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.5 -0.0 +0.0 -0.1
growth on ypd YPD -0.1 -0.4 -0.4 +0.1 +0.1
growth on oleic acid YNB Glucose -0.4 +0.0 -0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.1 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.6 +0.1 +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 +0.1 +0.1 -0.3
auxotrophy Dropout Complete -0.3 +0.1 +0.0 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.2 +0.0 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 -0.3 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 +0.2 -0.0 +0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.2 +0.1 +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.0 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 +0.1 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 +0.2 -0.0 -0.0
auxotrophy YNB Glucose -0.1 +0.1 +0.2 +0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.5 -0.1 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.4 +0.3 +0.1 +0.3
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