Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10999 and 11000 are separated by 1277 nucleotides11000 and 11001 are separated by 127 nucleotides11001 and 11002 are separated by 313 nucleotides11002 and 11003 are separated by 115 nucleotides mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632,765 to 634,825 10999 mRNA_2632: 11000 - Hypothetical Protein, at 636,103 to 638,450 11000 mRNA_2633: 11001 - HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784, at 638,578 to 641,420 11001 mRNA_2634: 11002 - KOG2234 Predicted UDP-galactose transporter, at 641,734 to 644,523 11002 mRNA_2635: 11003 - KOG2615 Permease of the major facilitator superfamily, at 644,639 to 646,229 11003
Group Condition mRNA_2631 mRNA_2632 mRNA_2633 mRNA_2634 mRNA_2635
10999 11000 11001 11002 11003
ypd buoyancy 40 hrs Low Buoyancy -1.2 -0.0 -0.0 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 +0.3 -0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.5 +0.1 +0.1 -0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.9 -0.0 +0.0 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.1 +0.1 +0.0 -0.3
growth on ypd YPD -0.4 -0.4 +0.1 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 +0.1 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.1 -0.0 -0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 -0.1 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 +0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 +0.0 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 -0.0 -0.0 -0.4
auxotrophy Dropout Complete +0.1 +0.0 -0.2 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.1 -0.1 -0.1
growth on oleic acid YNB Glucose +0.0 -0.1 -0.1 -0.0 +0.0
growth on ricinoleic acid YNB Glucose +0.2 +0.1 +0.0 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 -0.0 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.0 -0.0 -0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.1 +0.3 +0.1 -0.0
auxotrophy YNB Glucose +0.1 +0.2 +0.1 +0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 +0.1 +0.3 -0.1
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