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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11004 and 11005 are separated by 179 nucleotides
11005 and 11006 are separated by 276 nucleotides
11006 and 11007 are separated by 839 nucleotides
11007 and 11008 are separated by 920 nucleotides
mRNA_2636: 11004 - K01303 APEH acylaminoacyl-peptidase, at 646,481 to 649,252
11004
mRNA_2637: 11005 - HMMPfam-Sulphur transport-PF04143,HMMPfam-Domain of unknown function (DUF4341)-PF14241, at 649,432 to 650,669
11005
mRNA_2638: 11006 - SMART-heat shock factor-SM00415, at 650,946 to 653,673
11006
mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654,513 to 656,042
11007
mRNA_2640: 11008 - Hypothetical Protein, at 656,963 to 657,920
11008
Group
Condition
mRNA
_2636
mRNA
_2637
mRNA
_2638
mRNA
_2639
mRNA
_2640
11004
11005
11006
11007
11008
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.0
-0.1
-0.8
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.2
-0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
-0.0
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
-0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.4
+0.4
-0.4
-0.1
auxotrophy
Dropout Complete
+0.1
-0.1
-0.1
-0.1
-0.2
growth on oleic acid
YNB Glucose
+0.1
-0.1
-0.3
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.0
-0.0
-0.6
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.3
-0.0
-0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.2
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
+0.2
-0.0
-0.2
auxotrophy
YNB Glucose
+0.1
+0.0
-0.0
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
-0.2
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
+0.1
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.2
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
+0.2
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
+0.1
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.1
+0.3
-0.0
+0.2
growth on ypd
YPD
+0.2
+0.0
+0.1
+0.0
+0.2
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