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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11005 and 11006 are separated by 276 nucleotides
11006 and 11007 are separated by 839 nucleotides
11007 and 11008 are separated by 920 nucleotides
11008 and 11009 are separated by 282 nucleotides
mRNA_2637: 11005 - HMMPfam-Sulphur transport-PF04143,HMMPfam-Domain of unknown function (DUF4341)-PF14241, at 649,432 to 650,669
11005
mRNA_2638: 11006 - SMART-heat shock factor-SM00415, at 650,946 to 653,673
11006
mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654,513 to 656,042
11007
mRNA_2640: 11008 - Hypothetical Protein, at 656,963 to 657,920
11008
mRNA_2641: 11009 - Hypothetical Protein, at 658,203 to 659,346
11009
Group
Condition
mRNA
_2637
mRNA
_2638
mRNA
_2639
mRNA
_2640
mRNA
_2641
11005
11006
11007
11008
11009
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.1
-0.8
-0.2
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
-0.1
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.1
+0.0
+0.1
-0.6
growth on oleic acid
YNB Glucose
-0.1
-0.3
-0.1
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-0.1
-0.1
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.2
-0.0
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
-0.3
-0.2
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.2
-0.1
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
-0.3
-0.0
-0.0
auxotrophy
Dropout Complete
-0.1
-0.1
-0.1
-0.2
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.4
-0.4
-0.1
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
-0.1
+0.1
+0.4
growth on oleic acid
YNB Oleic Acid
+0.0
-0.2
-0.0
-0.1
+0.4
auxotrophy
YNB Glucose
+0.0
-0.0
-0.1
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
+0.1
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.1
+0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.0
-0.6
+0.0
+0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.3
-0.0
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.2
+0.1
+0.2
+0.1
growth on ypd
YPD
+0.0
+0.1
+0.0
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
+0.0
+0.2
+0.3
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