Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11008 and 11009 are separated by 282 nucleotides11009 and 11010 are separated by 523 nucleotides11010 and 11011 are separated by 266 nucleotides11011 and 11012 are separated by 169 nucleotides mRNA_2640: 11008 - Hypothetical Protein, at 656,963 to 657,920 11008 mRNA_2641: 11009 - Hypothetical Protein, at 658,203 to 659,346 11009 mRNA_2642: 11010 - K17428 MRPL47, NCM1 large subunit ribosomal protein L47, at 659,870 to 660,906 11010 mRNA_2643: 11011 - K01254 LTA4H leukotriene-A4 hydrolase, at 661,173 to 664,262 11011 mRNA_2644: 11012 - SUPERFAMILY--SSF52058, at 664,432 to 665,418 11012
Group Condition mRNA_2640 mRNA_2641 mRNA_2642 mRNA_2643 mRNA_2644
11008 11009 11010 11011 11012
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.5 N.D. -0.4 -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.6 N.D. -0.2 -0.8
growth on ricinoleic acid YNB Glucose -0.1 +0.4 N.D. -0.2 -1.3
growth on oleic acid YNB Oleic Acid -0.1 +0.4 N.D. -0.3 -0.7
auxotrophy Dropout Complete -0.2 +0.5 N.D. -0.1 -0.8
growth on oleic acid YNB Glucose -0.1 +0.2 N.D. +0.0 -0.7
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.2 N.D. +0.3 -0.9
auxotrophy YNB Glucose -0.0 +0.2 N.D. +0.3 -0.9
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.7 N.D. -0.5 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.5 N.D. +0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 N.D. +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 N.D. +0.1 +0.3
growth on ypd YPD +0.2 +0.1 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.2 N.D. -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 N.D. +0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.4 N.D. -0.4 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 N.D. +0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 N.D. -0.3 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 N.D. +0.0 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 N.D. -0.1 +0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.6 N.D. +0.1 +1.0
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