Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11010 and 11011 are separated by 266 nucleotides11011 and 11012 are separated by 169 nucleotides11012 and 11013 are separated by 325 nucleotides11013 and 11014 are separated by 280 nucleotides mRNA_2642: 11010 - K17428 MRPL47, NCM1 large subunit ribosomal protein L47, at 659,870 to 660,906 11010 mRNA_2643: 11011 - K01254 LTA4H leukotriene-A4 hydrolase, at 661,173 to 664,262 11011 mRNA_2644: 11012 - SUPERFAMILY--SSF52058, at 664,432 to 665,418 11012 mRNA_2645: 11013 - Hypothetical Protein, at 665,744 to 666,738 11013 mRNA_2646: 11014 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52058, at 667,019 to 668,057 11014
Group Condition mRNA_2642 mRNA_2643 mRNA_2644 mRNA_2645 mRNA_2646
11010 11011 11012 11013 11014
auxotrophy Dropout Complete N.D. -0.1 -0.8 -0.7 -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -1.6 -0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.9 -0.5 -0.8
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.7 -0.4 -0.3
growth on ricinoleic acid YNB Glucose N.D. -0.2 -1.3 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 -0.8 +0.0 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.7 +0.1 -0.5
auxotrophy YNB Glucose N.D. +0.3 -0.9 -0.2 -0.7
growth on oleic acid YNB Glucose N.D. +0.0 -0.7 +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 -0.4 -0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 +0.5 +0.8 -1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 -0.0 +0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 -0.7 -0.9 +1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.4 -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 +0.4 +0.7 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.8 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.3 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +1.0 +0.5 -1.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.7 -0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.4 -0.2 +0.8
growth on ypd YPD N.D. -0.1 +0.2 +0.2 +1.0
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