Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11016 and 11017 are separated by 2530 nucleotides11017 and 11018 are separated by 1598 nucleotides11018 and 11019 are separated by 564 nucleotides11019 and 11020 are separated by 241 nucleotides mRNA_2648: 11016 - SUPERFAMILY--SSF52058, at 669,418 to 670,426 11016 mRNA_2649: 11017 - K08157 TPO1 MFS transporter, DHA1 family, multidrug resistance protein, at 672,957 to 675,080 11017 mRNA_2650: 11018 - BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa], at 676,679 to 679,842 11018 mRNA_2651: 11019 - Hypothetical Protein, at 680,407 to 680,751 11019 mRNA_2652: 11020 - Hypothetical Protein, at 680,993 to 681,631 11020
Group Condition mRNA_2648 mRNA_2649 mRNA_2650 mRNA_2651 mRNA_2652
11016 11017 11018 11019 11020
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.6 -0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 -0.1 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.8 -0.0 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.6 +0.4 -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.2 -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.3 -0.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 -0.2 -0.2 N.D.
growth on ypd YPD -0.1 -0.4 -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.1 -0.0 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.3 +0.1 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.0 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 +0.1 -0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.3 +0.0 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.1 +0.1 +0.2 N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 -0.2 +0.1 N.D.
auxotrophy Dropout Complete -0.1 +0.0 -0.1 +0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.1 +0.1 +0.4 N.D.
auxotrophy YNB Glucose -0.2 +0.3 +0.1 +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.1 +0.6 N.D.
remove
mRNA_2648
plot
remove
mRNA_2649
plot
remove
mRNA_2650
remove
mRNA_2651
plot
remove
mRNA_2652
plot