Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11017 and 11018 are separated by 1598 nucleotides11018 and 11019 are separated by 564 nucleotides11019 and 11020 are separated by 241 nucleotides11020 and 11021 are separated by 559 nucleotides mRNA_2649: 11017 - K08157 TPO1 MFS transporter, DHA1 family, multidrug resistance protein, at 672,957 to 675,080 11017 mRNA_2650: 11018 - BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa], at 676,679 to 679,842 11018 mRNA_2651: 11019 - Hypothetical Protein, at 680,407 to 680,751 11019 mRNA_2652: 11020 - Hypothetical Protein, at 680,993 to 681,631 11020 mRNA_2653: 11021 - K15040 VDAC2 voltage-dependent anion channel protein 2, at 682,191 to 683,966 11021
Group Condition mRNA_2649 mRNA_2650 mRNA_2651 mRNA_2652 mRNA_2653
11017 11018 11019 11020 11021
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 -0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.0 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 -0.3 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.4 -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -0.2 N.D. N.D.
growth on ypd YPD -0.4 -0.1 +0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.1 -0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.3 +0.0 -0.4 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 -0.2 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 +0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 -0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 +0.2 N.D. N.D.
auxotrophy Dropout Complete +0.0 -0.1 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 +0.6 N.D. N.D.
auxotrophy YNB Glucose +0.3 +0.1 +0.6 N.D. N.D.
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