Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11021 and 11022 are separated by 1194 nucleotides11022 and 11023 are separated by 403 nucleotides11023 and 11024 are separated by 147 nucleotides11024 and 11025 are separated by 483 nucleotides mRNA_2653: 11021 - K15040 VDAC2 voltage-dependent anion channel protein 2, at 682,191 to 683,966 11021 mRNA_2654: 11022 - K00864 glpK, GK glycerol kinase, at 685,161 to 688,307 11022 mRNA_2655: 11023 - HMMPfam-Protein of unknown function (DUF1479)-PF07350,SUPERFAMILY--SSF51197, at 688,711 to 690,606 11023 mRNA_2656: 11024 - KOG3417 Ras1 guanine nucleotide exchange factor, at 690,754 to 695,161 11024 mRNA_2657: 11025 - K02155 ATPeV0C, ATP6L V-type H+-transporting ATPase 16kDa proteolipid subunit, at 695,645 to 696,729 11025
Group Condition mRNA_2653 mRNA_2654 mRNA_2655 mRNA_2656 mRNA_2657
11021 11022 11023 11024 11025
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 -1.0 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 -0.7 +0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.5 -0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.6 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -0.7 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.8 +0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 +0.1 -0.1 N.D.
growth on oleic acid YNB Glucose N.D. +0.2 -0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.5 +0.3 N.D.
auxotrophy Dropout Complete N.D. -0.2 -0.2 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.1 +0.0 N.D.
growth on ypd YPD N.D. -0.2 +0.2 -0.0 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.0 -0.0 +0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.4 +0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +0.3 +0.3 N.D.
auxotrophy YNB Glucose N.D. +0.2 +0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 +0.2 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 +0.3 +0.8 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 +0.1 +1.0 N.D.
remove
mRNA_2653
plot
remove
mRNA_2654
plot
remove
mRNA_2655
remove
mRNA_2656
plot
remove
mRNA_2657
plot