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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11026 and 11027 are separated by 69 nucleotides
11027 and 11028 are separated by 202 nucleotides
11028 and 11029 are separated by 98 nucleotides
11029 and 11030 are separated by 1049 nucleotides
mRNA_2658: 11026 - BLAST transmembrane amino acid transporter protein [Rhizoct..., at 696,995 to 699,580
11026
mRNA_2659: 11027 - Hypothetical Protein, at 699,650 to 700,523
11027
mRNA_2660: 11028 - Hypothetical Protein, at 700,726 to 702,526
11028
mRNA_2661: 11029 - Interpro GDP-fucose protein O-fucosyltransferase, at 702,625 to 704,593
11029
mRNA_2662: 11030 - Interpro Bacterial protein of unknown function (HtrL_YibB), at 705,643 to 707,120
11030
Group
Condition
mRNA
_2658
mRNA
_2659
mRNA
_2660
mRNA
_2661
mRNA
_2662
11026
11027
11028
11029
11030
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.5
+0.5
+0.5
-0.9
growth on ypd
YPD
-0.5
+0.0
-0.1
+0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
+0.1
-0.0
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
+0.3
+0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.3
+1.1
-0.6
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
-0.1
+0.5
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
+0.2
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
+0.1
+0.3
+0.4
growth on oleic acid
YNB Glucose
-0.2
-0.2
+0.0
+0.4
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.2
+0.3
+0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
+0.2
+0.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
+0.6
+0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.0
+0.7
+0.3
+0.0
auxotrophy
Dropout Complete
+0.0
-0.1
+0.4
+0.5
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.3
+1.0
+0.6
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
+0.8
+0.4
+0.7
growth on ricinoleic acid
YNB Glucose
+0.2
-0.2
+1.1
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.3
+1.0
+0.9
-0.3
auxotrophy
YNB Glucose
-0.1
+0.0
+0.7
+0.8
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.3
+1.1
+1.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.4
+1.5
+0.8
-0.3
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