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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11030 and 11031 are separated by 525 nucleotides
11031 and 11032 are separated by 752 nucleotides
11032 and 11033 are separated by 1158 nucleotides
11033 and 11034 are separated by 357 nucleotides
mRNA_2662: 11030 - Interpro Bacterial protein of unknown function (HtrL_YibB), at 705,643 to 707,120
11030
mRNA_2663: 11031 - Hypothetical Protein, at 707,646 to 708,293
11031
mRNA_2664: 11032 - Hypothetical Protein, at 709,046 to 711,250
11032
mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712,409 to 714,651
11033
mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715,009 to 717,266
11034
Group
Condition
mRNA
_2662
mRNA
_2663
mRNA
_2664
mRNA
_2665
mRNA
_2666
11030
11031
11032
11033
11034
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.6
-0.1
-0.4
-0.1
auxotrophy
Dropout Complete
+0.3
-0.4
-0.0
-0.4
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.5
-0.6
+0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
-0.5
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.7
+0.0
+0.1
-0.0
auxotrophy
YNB Glucose
+0.4
-0.3
+0.1
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.6
+0.3
+0.5
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
-0.3
+0.2
+0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.1
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.2
+0.2
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.3
-0.3
+0.3
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.0
+0.2
+0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.3
+0.1
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
+0.2
+0.1
+0.7
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.7
-0.4
+0.2
+0.0
-0.1
growth on oleic acid
YNB Glucose
+0.5
-0.1
-0.4
+0.4
-0.0
growth on oleic acid
YNB Oleic Acid
+0.4
+0.1
-0.4
+0.6
-0.1
growth on ypd
YPD
-0.1
+0.5
-0.3
+0.4
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.2
+0.1
+0.5
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
+0.1
+0.7
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.1
+0.4
+0.9
+0.1
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