Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11033 and 11034 are separated by 357 nucleotides11034 and 11035 are separated by 593 nucleotides11035 and 11036 are separated by 109 nucleotides11036 and 11037 are separated by 290 nucleotides mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712,409 to 714,651 11033 mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715,009 to 717,266 11034 mRNA_2667: 11035 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 717,860 to 720,887 11035 mRNA_2668: 11036 - K00049 GRHPR glyoxylate/hydroxypyruvate reductase, at 720,997 to 722,358 11036 mRNA_2669: 11037 - Hypothetical Protein, at 722,649 to 723,844 11037
Group Condition mRNA_2665 mRNA_2666 mRNA_2667 mRNA_2668 mRNA_2669
11033 11034 11035 11036 11037
auxotrophy Dropout Complete -0.4 -0.2 -0.1 +0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 -0.1 +0.0 -0.2
auxotrophy YNB Glucose -0.2 -0.4 -0.0 +0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.1 -0.0 +0.0 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 +0.1 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 -0.1 +0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 -0.0 -0.2 +0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.2 +0.0 +0.2 -0.2
growth on oleic acid YNB Oleic Acid +0.6 -0.1 -0.0 -0.3 -0.1
growth on oleic acid YNB Glucose +0.4 -0.0 -0.1 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 -0.0 +0.5 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.2 +0.1 +0.0 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.0 +0.2 -0.2 +0.3
growth on ypd YPD +0.4 +0.1 -0.4 +0.2 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.1 -0.2 +0.5 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.1 -0.4 +0.0 +1.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.3 -0.0 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.1 +0.2 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 +0.4 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +0.2 +0.2 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 +0.1 +0.2 +0.5 +0.4
remove
mRNA_2665
plot
remove
mRNA_2666
plot
remove
mRNA_2667
remove
mRNA_2668
plot
remove
mRNA_2669
plot