Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11040 and 11041 are separated by 800 nucleotides11041 and 11042 are separated by 454 nucleotides11042 and 11043 are separated by 1382 nucleotides11043 and 11044 are separated by 1059 nucleotides mRNA_2672: 11040 - K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17, at 730,581 to 733,538 11040 mRNA_2673: 11041 - K10844 ERCC2, XPD DNA excision repair protein ERCC-2, at 734,339 to 738,341 11041 mRNA_2674: 11042 - Hypothetical Protein, at 738,796 to 742,591 11042 mRNA_2675: 11043 - HMMPfam-Putative adipose-regulatory protein (Seipin)-PF06775, at 743,974 to 745,972 11043 mRNA_2676: 11044 - K06672 SCC2, NIPBL cohesin loading factor subunit SCC2, at 747,032 to 753,386 11044
Group Condition mRNA_2672 mRNA_2673 mRNA_2674 mRNA_2675 mRNA_2676
11040 11041 11042 11043 11044
growth on ricinoleic acid YNB Ricinoleic Acid -1.8 N.D. +0.2 +0.1 N.D.
auxotrophy YNB Glucose -1.5 N.D. +0.1 +0.0 N.D.
auxotrophy Dropout Complete -1.1 N.D. -0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -1.7 N.D. +0.2 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 N.D. -0.0 -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -1.3 N.D. +0.1 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -1.2 N.D. -0.0 +0.2 N.D.
growth on ypd YPD -0.6 N.D. +0.2 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.7 N.D. +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.1 -0.0 N.D.
growth on oleic acid YNB Glucose -0.3 N.D. +0.1 -0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.1 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.0 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. +0.4 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 N.D. +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 N.D. +0.1 +0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 N.D. +0.1 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. +0.2 +2.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 N.D. +0.2 +1.1 N.D.
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