Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11043 and 11044 are separated by 1059 nucleotides11044 and 11045 are separated by 3601 nucleotides11045 and 11046 are separated by 628 nucleotides11046 and 11047 are separated by 71 nucleotides mRNA_2675: 11043 - HMMPfam-Putative adipose-regulatory protein (Seipin)-PF06775, at 743,974 to 745,972 11043 mRNA_2676: 11044 - K06672 SCC2, NIPBL cohesin loading factor subunit SCC2, at 747,032 to 753,386 11044 mRNA_2677: 11045 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 756,988 to 757,590 11045 mRNA_2678: 11046 - KOG3102 Uncharacterized conserved protein, at 758,219 to 759,317 11046 mRNA_2679: 11047 - K14262 DUG2 di- and tripeptidase, at 759,389 to 763,569 11047
Group Condition mRNA_2675 mRNA_2676 mRNA_2677 mRNA_2678 mRNA_2679
11043 11044 11045 11046 11047
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.5 -1.7 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.8 -2.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. -0.0 -0.5 +0.3
growth on oleic acid YNB Glucose -0.0 N.D. -0.0 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.4 +0.3 -0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.6 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -0.4 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -0.6 +0.6 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.0 +0.5 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.4 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.3 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.4 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. +1.0 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. +0.7 +0.2 -0.1
auxotrophy YNB Glucose +0.0 N.D. +0.8 +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.7 +0.0 +0.2
growth on ypd YPD -0.1 N.D. +1.1 +0.3 -0.1
auxotrophy Dropout Complete -0.1 N.D. +1.0 +0.6 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +2.4 N.D. -0.3 -0.8 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.1 N.D. +0.0 +0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +1.1 +0.6 -0.0
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