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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11045 and 11046 are separated by 628 nucleotides
11046 and 11047 are separated by 71 nucleotides
11047 and 11048 are separated by 495 nucleotides
11048 and 11049 are separated by 710 nucleotides
mRNA_2677: 11045 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 756,988 to 757,590
11045
mRNA_2678: 11046 - KOG3102 Uncharacterized conserved protein, at 758,219 to 759,317
11046
mRNA_2679: 11047 - K14262 DUG2 di- and tripeptidase, at 759,389 to 763,569
11047
mRNA_2680: 11048 - Hypothetical Protein, at 764,065 to 765,232
11048
mRNA_2681: 11049 - Hypothetical Protein, at 765,943 to 766,697
11049
Group
Condition
mRNA
_2677
mRNA
_2678
mRNA
_2679
mRNA
_2680
mRNA
_2681
11045
11046
11047
11048
11049
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.8
+0.1
-0.6
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.7
-0.1
+0.2
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-2.0
-0.2
+0.7
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.3
+0.2
-0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.5
+0.3
+0.0
+0.2
growth on oleic acid
YNB Glucose
-0.0
-0.2
+0.0
+0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.3
-0.1
+0.0
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.2
-0.0
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.5
-0.0
-0.4
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.0
-0.1
+0.3
-0.4
growth on oleic acid
YNB Oleic Acid
+0.6
-0.6
+0.1
+0.3
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
-0.3
-0.1
+0.1
+0.0
auxotrophy
YNB Glucose
+0.8
+0.2
+0.0
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.7
+0.2
-0.1
-0.1
+0.2
auxotrophy
Dropout Complete
+1.0
+0.6
-0.3
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.4
+0.3
-0.2
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.6
+0.3
+0.0
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.4
+0.2
+0.0
+0.4
growth on ricinoleic acid
YNB Glucose
+0.7
+0.0
+0.2
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+1.1
+0.6
-0.0
-0.0
+0.1
growth on ypd
YPD
+1.1
+0.3
-0.1
+0.2
+0.5
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