Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11054 and 11055 are separated by 595 nucleotides11055 and 11056 are separated by 537 nucleotides mRNA_2686: 11054 - Interpro Fungal potassium channel 0, at 510 to 3,087 11054 mRNA_2687: 11055 - K16542 CDK5RAP2 CDK5 regulatory subunit-associated protein 2, at 3,683 to 8,144 11055 mRNA_2688: 11056 - Hypothetical Protein, at 8,682 to 9,968 11056
Group Condition mRNA_2686 mRNA_2687 mRNA_2688
11054 11055 11056
growth on ypd YPD -0.1 N.D. -1.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -1.6
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. -0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.3
auxotrophy YNB Glucose -0.4 N.D. +0.2
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.6
growth on oleic acid YNB Glucose -0.3 N.D. +0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +1.0
auxotrophy Dropout Complete +0.0 N.D. +1.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. +1.9
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