Fitness for 4 genes in Rhodosporidium toruloides IFO0880

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500 nt 11054 and 11055 are separated by 595 nucleotides11055 and 11056 are separated by 537 nucleotides11056 and 11057 are separated by 264 nucleotides mRNA_2686: 11054 - Interpro Fungal potassium channel 0, at 510 to 3,087 11054 mRNA_2687: 11055 - K16542 CDK5RAP2 CDK5 regulatory subunit-associated protein 2, at 3,683 to 8,144 11055 mRNA_2688: 11056 - Hypothetical Protein, at 8,682 to 9,968 11056 mRNA_2689: 11057 - K07422 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1, at 10,233 to 12,338 11057
Group Condition mRNA_2686 mRNA_2687 mRNA_2688 mRNA_2689
11054 11055 11056 11057
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -1.6 -0.4
growth on ypd YPD -0.1 N.D. -1.7 -0.1
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.8 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. -0.9 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.3 -0.3
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.1 -0.0
auxotrophy YNB Glucose -0.4 N.D. +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.8 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.6 -0.0
growth on oleic acid YNB Glucose -0.3 N.D. +0.9 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.7 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.6 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +1.0 +0.1
auxotrophy Dropout Complete +0.0 N.D. +1.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. +1.9 +0.0
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