Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11054 and 11055 are separated by 595 nucleotides
11055 and 11056 are separated by 537 nucleotides
11056 and 11057 are separated by 264 nucleotides
11057 and 11058 are separated by 1408 nucleotides
mRNA_2686: 11054 - Interpro Fungal potassium channel 0, at 510 to 3,087
11054
mRNA_2687: 11055 - K16542 CDK5RAP2 CDK5 regulatory subunit-associated protein 2, at 3,683 to 8,144
11055
mRNA_2688: 11056 - Hypothetical Protein, at 8,682 to 9,968
11056
mRNA_2689: 11057 - K07422 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1, at 10,233 to 12,338
11057
mRNA_2690: 11058 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 13,747 to 14,595
11058
Group
Condition
mRNA
_2686
mRNA
_2687
mRNA
_2688
mRNA
_2689
mRNA
_2690
11054
11055
11056
11057
11058
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
N.D.
-1.6
-0.4
-0.1
growth on ypd
YPD
-0.1
N.D.
-1.7
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
-0.8
+0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
-0.9
+0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
-0.3
-0.3
+0.0
auxotrophy
YNB Glucose
-0.4
N.D.
+0.2
+0.0
-0.0
growth on oleic acid
YNB Oleic Acid
-0.0
N.D.
-0.1
-0.0
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
-0.0
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
+0.2
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
+0.2
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.3
N.D.
+0.8
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
N.D.
+0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
+0.4
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
+0.4
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.6
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
N.D.
+0.7
+0.1
+0.0
growth on oleic acid
YNB Glucose
-0.3
N.D.
+0.9
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
N.D.
+0.6
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
+1.0
+0.1
+0.1
auxotrophy
Dropout Complete
+0.0
N.D.
+1.4
+0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
+1.9
+0.0
+0.0
remove
mRNA_2686
plot
remove
mRNA_2687
plot
remove
mRNA_2688
remove
mRNA_2689
plot
remove
mRNA_2690
plot