Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11057 and 11058 are separated by 1408 nucleotides11058 and 11059 are separated by 964 nucleotides11059 and 11060 are separated by 195 nucleotides11060 and 11061 are separated by 649 nucleotides mRNA_2689: 11057 - K07422 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1, at 10,233 to 12,338 11057 mRNA_2690: 11058 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 13,747 to 14,595 11058 mRNA_2691: 11059 - Hypothetical Protein, at 15,560 to 16,423 11059 mRNA_2692: 11060 - K06656 PCL1 G1/S-specific cyclin PLC1, at 16,619 to 17,964 11060 mRNA_2693: 11061 - K18470 ARHGAP1, CDC42GAP Rho GTPase-activating protein 1, at 18,614 to 20,530 11061
Group Condition mRNA_2689 mRNA_2690 mRNA_2691 mRNA_2692 mRNA_2693
11057 11058 11059 11060 11061
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1 +0.0 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 -0.0 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.0 -0.5 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.0 +0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 +0.1 -0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 -0.1 -0.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.0 -0.3 -0.1 +0.2
auxotrophy Dropout Complete +0.1 -0.0 -0.1 -0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.0 +0.0 +0.0 -0.0 -0.1
growth on oleic acid YNB Glucose -0.0 +0.1 -0.0 -0.1 -0.0
growth on ypd YPD -0.1 +0.1 -0.1 +0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 +0.2 -0.4 +0.1
auxotrophy YNB Glucose +0.0 -0.0 -0.0 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 +0.0 +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.0 +0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 -0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +0.1 +0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.0 +0.1 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.2 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.3 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.3 +0.5 +0.1
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