Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11066 and 11067 are separated by 1229 nucleotides11067 and 11068 are separated by 1034 nucleotides11068 and 11069 are separated by 1127 nucleotides11069 and 11070 are separated by 333 nucleotides mRNA_2698: 11066 - Hypothetical Protein, at 31,777 to 32,871 11066 mRNA_2699: 11067 - K08066 NFYC nuclear transcription factor Y, gamma, at 34,101 to 34,789 11067 mRNA_2700: 11068 - K03019 RPC11, POLR3K DNA-directed RNA polymerase III subunit RPC11, at 35,824 to 36,615 11068 mRNA_2701: 11069 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 37,743 to 40,782 11069 mRNA_2702: 11070 - BLAST TRAF-like [Xanthophyllomyces dendrorhous], at 41,116 to 42,334 11070
Group Condition mRNA_2698 mRNA_2699 mRNA_2700 mRNA_2701 mRNA_2702
11066 11067 11068 11069 11070
auxotrophy YNB Glucose +0.2 -0.3 N.D. -3.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.2 N.D. -3.6 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.8 N.D. -2.5 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -3.8 N.D. +1.3 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.4 N.D. -2.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.2 N.D. -2.4 -0.2
growth on oleic acid YNB Oleic Acid +0.3 -0.6 N.D. -1.8 -0.2
growth on oleic acid YNB Glucose -0.2 +0.3 N.D. -2.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.2 N.D. -0.5 -0.3
auxotrophy Dropout Complete +0.4 -0.2 N.D. -2.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.7 N.D. -2.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 N.D. -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -1.7 N.D. -0.3 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -1.1 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.7 N.D. -1.5 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.3 N.D. -1.0 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +1.8 N.D. -2.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.6 N.D. +0.8 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.1 N.D. +0.7 -0.1
growth on ypd YPD +0.2 +0.1 N.D. +2.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.8 N.D. +1.5 +0.5
remove
mRNA_2698
plot		 remove
mRNA_2699
plot		 remove
mRNA_2700		 remove
mRNA_2701
plot		 remove
mRNA_2702
plot