Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11067 and 11068 are separated by 1034 nucleotides11068 and 11069 are separated by 1127 nucleotides11069 and 11070 are separated by 333 nucleotides11070 and 11071 are separated by 298 nucleotides mRNA_2699: 11067 - K08066 NFYC nuclear transcription factor Y, gamma, at 34,101 to 34,789 11067 mRNA_2700: 11068 - K03019 RPC11, POLR3K DNA-directed RNA polymerase III subunit RPC11, at 35,824 to 36,615 11068 mRNA_2701: 11069 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 37,743 to 40,782 11069 mRNA_2702: 11070 - BLAST TRAF-like [Xanthophyllomyces dendrorhous], at 41,116 to 42,334 11070 mRNA_2703: 11071 - Hypothetical Protein, at 42,633 to 43,267 11071
Group Condition mRNA_2699 mRNA_2700 mRNA_2701 mRNA_2702 mRNA_2703
11067 11068 11069 11070 11071
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -3.6 -0.2 -0.8
auxotrophy YNB Glucose -0.3 N.D. -3.7 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. -2.5 +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. -2.6 -0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -2.4 -0.2 -0.4
auxotrophy Dropout Complete -0.2 N.D. -2.0 -0.2 -0.6
growth on oleic acid YNB Oleic Acid -0.6 N.D. -1.8 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.2 N.D. -0.5 -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -3.8 N.D. +1.3 +0.3 -0.1
growth on oleic acid YNB Glucose +0.3 N.D. -2.2 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 N.D. -0.2 -0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.7 N.D. -2.2 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.7 N.D. -0.3 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -1.0 +0.5 -0.6
growth on ricinoleic acid YNB Glucose +0.7 N.D. -1.5 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.4 -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +1.8 N.D. -2.1 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.6 N.D. +0.8 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.7 -0.1 +0.2
growth on ypd YPD +0.1 N.D. +2.5 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 N.D. +1.5 +0.5 -0.4
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