Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11069 and 11070 are separated by 333 nucleotides11070 and 11071 are separated by 298 nucleotides11071 and 11072 are separated by 868 nucleotides11072 and 11073 are separated by 622 nucleotides mRNA_2701: 11069 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 37,743 to 40,782 11069 mRNA_2702: 11070 - BLAST TRAF-like [Xanthophyllomyces dendrorhous], at 41,116 to 42,334 11070 mRNA_2703: 11071 - Hypothetical Protein, at 42,633 to 43,267 11071 mRNA_2704: 11072 - SUPERFAMILY--SSF54695, at 44,136 to 45,724 11072 mRNA_2705: 11073 - Hypothetical Protein, at 46,347 to 46,971 11073
Group Condition mRNA_2701 mRNA_2702 mRNA_2703 mRNA_2704 mRNA_2705
11069 11070 11071 11072 11073
growth on ricinoleic acid YNB Ricinoleic Acid -3.6 -0.2 -0.8 -0.2 -0.2
auxotrophy YNB Glucose -3.7 +0.1 -0.3 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -2.6 -0.1 -0.4 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -2.4 -0.2 -0.4 -0.0 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -2.2 +0.2 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -2.5 +0.0 -0.4 +0.1 +0.2
growth on oleic acid YNB Glucose -2.2 -0.0 -0.0 +0.2 -0.2
auxotrophy Dropout Complete -2.0 -0.2 -0.6 +0.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -2.1 -0.1 +0.0 +0.0 +0.0
growth on oleic acid YNB Oleic Acid -1.8 -0.2 -0.2 +0.1 -0.2
growth on ricinoleic acid YNB Glucose -1.5 +0.2 -0.1 -0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.3 -0.3 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 +0.5 -0.6 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.5 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 +0.2 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.5 -0.0 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.7 -0.1 +0.2 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.8 -0.1 +0.3 -0.5 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +1.3 +0.3 -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.5 +0.5 -0.4 +0.0 -0.1
growth on ypd YPD +2.5 -0.2 -0.4 -0.1 +0.1
remove
mRNA_2701
plot
remove
mRNA_2702
plot
remove
mRNA_2703
remove
mRNA_2704
plot
remove
mRNA_2705
plot