Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11080 and 11081 are separated by 189 nucleotides11081 and 11082 are separated by 1804 nucleotides11082 and 11083 are separated by 541 nucleotides11083 and 11084 are separated by 66 nucleotides mRNA_2712: 11080 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 58,923 to 60,414 11080 mRNA_2713: 11081 - BLAST Clp1-like protein, putative [Rhizoctonia solani AG-3 ..., at 60,604 to 61,559 11081 mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63,364 to 66,371 11082 mRNA_2715: 11083 - Hypothetical Protein, at 66,913 to 70,114 11083 mRNA_2716: 11084 - Hypothetical Protein, at 70,181 to 71,077 11084
Group Condition mRNA_2712 mRNA_2713 mRNA_2714 mRNA_2715 mRNA_2716
11080 11081 11082 11083 11084
auxotrophy Dropout Complete +0.0 -0.7 -0.1 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.4 -0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.4 -0.6 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.3 -0.2 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.5 -0.4 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 -0.0 +0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.0 -0.6 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.3 -0.4 -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.6 -0.4 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 -0.0 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 -0.0 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 -0.1 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.2 +0.4 -0.2 -0.2
growth on oleic acid YNB Glucose +0.4 +0.1 -0.2 -0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.6 -0.2 -0.3 -0.1 +0.2
auxotrophy YNB Glucose +0.3 +0.2 +0.1 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.2 -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.4 -0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.3 +0.3 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.5 +0.0 -0.3 +0.0
growth on ypd YPD +0.3 +0.6 -0.1 -0.1 -0.1
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