Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11080 and 11081 are separated by 189 nucleotides
11081 and 11082 are separated by 1804 nucleotides
11082 and 11083 are separated by 541 nucleotides
11083 and 11084 are separated by 66 nucleotides
mRNA_2712: 11080 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 58,923 to 60,414
11080
mRNA_2713: 11081 - BLAST Clp1-like protein, putative [Rhizoctonia solani AG-3 ..., at 60,604 to 61,559
11081
mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63,364 to 66,371
11082
mRNA_2715: 11083 - Hypothetical Protein, at 66,913 to 70,114
11083
mRNA_2716: 11084 - Hypothetical Protein, at 70,181 to 71,077
11084
Group
Condition
mRNA
_2712
mRNA
_2713
mRNA
_2714
mRNA
_2715
mRNA
_2716
11080
11081
11082
11083
11084
auxotrophy
Dropout Complete
+0.0
-0.7
-0.1
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.4
-0.2
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.4
-0.6
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.3
-0.2
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.5
-0.4
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.1
-0.0
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.0
-0.6
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.3
-0.4
-0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.6
-0.4
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
-0.0
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.2
-0.0
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
-0.1
-0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.2
+0.4
-0.2
-0.2
growth on oleic acid
YNB Glucose
+0.4
+0.1
-0.2
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.6
-0.2
-0.3
-0.1
+0.2
auxotrophy
YNB Glucose
+0.3
+0.2
+0.1
-0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.2
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
+0.4
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
+0.3
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.5
+0.0
-0.3
+0.0
growth on ypd
YPD
+0.3
+0.6
-0.1
-0.1
-0.1
remove
mRNA_2712
plot
remove
mRNA_2713
plot
remove
mRNA_2714
remove
mRNA_2715
plot
remove
mRNA_2716
plot