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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11082 and 11083 are separated by 541 nucleotides
11083 and 11084 are separated by 66 nucleotides
11084 and 11085 are separated by 361 nucleotides
11085 and 11086 are separated by 51 nucleotides
mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63,364 to 66,371
11082
mRNA_2715: 11083 - Hypothetical Protein, at 66,913 to 70,114
11083
mRNA_2716: 11084 - Hypothetical Protein, at 70,181 to 71,077
11084
mRNA_2717: 11085 - HMMPfam-Nitronate monooxygenase-PF03060,SUPERFAMILY--SSF51412, at 71,439 to 72,597
11085
mRNA_2718: 11086 - SUPERFAMILY--SSF50475, at 72,649 to 73,814
11086
Group
Condition
mRNA
_2714
mRNA
_2715
mRNA
_2716
mRNA
_2717
mRNA
_2718
11082
11083
11084
11085
11086
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
-0.2
-0.8
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.2
-0.3
-0.4
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.0
-0.0
-0.6
+0.3
growth on oleic acid
YNB Glucose
-0.2
-0.3
+0.1
+0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
-0.2
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.2
-0.3
-0.4
+0.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
+0.2
-0.3
-0.2
auxotrophy
Dropout Complete
-0.1
-0.3
-0.2
+0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.1
+0.2
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.2
-0.2
+0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.1
-0.1
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
+0.0
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.3
-0.1
-0.0
+0.2
auxotrophy
YNB Glucose
+0.1
-0.2
-0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.3
+0.1
-0.3
+0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.2
+0.2
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.1
+0.3
+0.0
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.2
+0.0
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
+0.1
+0.3
+0.2
growth on ypd
YPD
-0.1
-0.1
-0.1
+0.4
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
-0.1
+0.3
+0.1
-0.2
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