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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11085 and 11086 are separated by 51 nucleotides
11086 and 11087 are separated by 228 nucleotides
11087 and 11088 are separated by 348 nucleotides
11088 and 11089 are separated by 175 nucleotides
mRNA_2717: 11085 - HMMPfam-Nitronate monooxygenase-PF03060,SUPERFAMILY--SSF51412, at 71,439 to 72,597
11085
mRNA_2718: 11086 - SUPERFAMILY--SSF50475, at 72,649 to 73,814
11086
mRNA_2719: 11087 - Hypothetical Protein, at 74,043 to 75,833
11087
mRNA_2720: 11088 - Hypothetical Protein, at 76,182 to 76,700
11088
mRNA_2721: 11089 - BLAST metallophosphoesterase domain-containing protein [Muc..., at 76,876 to 78,981
11089
Group
Condition
mRNA
_2717
mRNA
_2718
mRNA
_2719
mRNA
_2720
mRNA
_2721
11085
11086
11087
11088
11089
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.4
+0.2
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
-0.4
-0.1
-0.2
growth on oleic acid
YNB Glucose
+0.1
-0.4
-0.3
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
+0.2
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.1
-0.0
+0.3
+0.6
auxotrophy
Dropout Complete
+0.3
-0.2
-0.2
+0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.2
-0.5
-0.2
+0.5
growth on oleic acid
YNB Oleic Acid
-0.3
-0.2
-0.3
+0.2
+0.8
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
-0.2
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.3
-0.0
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.2
-0.1
+0.2
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.2
+0.0
+0.1
-0.1
auxotrophy
YNB Glucose
-0.1
+0.1
-0.1
+0.2
+0.2
growth on ypd
YPD
+0.4
+0.1
-0.2
+0.0
+0.0
growth on ricinoleic acid
YNB Glucose
+0.0
-0.2
+0.0
+0.0
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.4
-0.3
+0.2
+1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.0
+0.5
+0.0
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
-0.1
+0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
-0.1
+0.1
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.3
+0.2
-0.1
+1.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.3
+0.3
+0.2
+0.6
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