Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11090 and 11091 are separated by 329 nucleotides11091 and 11092 are separated by 164 nucleotides11092 and 11093 are separated by 705 nucleotides11093 and 11094 are separated by 338 nucleotides mRNA_2722: 11090 - KOG4117 Heat shock factor binding protein, at 79,182 to 79,739 11090 mRNA_2723: 11091 - K03258 EIF4B translation initiation factor 4B, at 80,069 to 82,121 11091 mRNA_2724: 11092 - HMMPfam-Ribosomal protein L30p/L7e-PF00327,SUPERFAMILY--SSF55129, at 82,286 to 82,840 11092 mRNA_2725: 11093 - HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522, at 83,546 to 84,542 11093 mRNA_2726: 11094 - K01725 cynS cyanate lyase, at 84,881 to 85,852 11094
Group Condition mRNA_2722 mRNA_2723 mRNA_2724 mRNA_2725 mRNA_2726
11090 11091 11092 11093 11094
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.4 -1.4
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. -0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -0.0 -0.1
growth on ypd YPD N.D. N.D. N.D. -0.1 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. -0.0 +0.2
growth on oleic acid YNB Glucose N.D. N.D. N.D. +0.1 +0.1
auxotrophy Dropout Complete N.D. N.D. N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. -0.1 +0.4
auxotrophy YNB Glucose N.D. N.D. N.D. -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. -0.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. +0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.2 +0.6
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