Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11100 and 11101 are separated by 209 nucleotides11101 and 11102 are separated by 292 nucleotides11102 and 11103 are separated by 133 nucleotides11103 and 11104 are separated by 185 nucleotides mRNA_2732: 11100 - Hypothetical Protein, at 95,429 to 95,692 11100 mRNA_2733: 11101 - KOG0254 Predicted transporter (major facilitator superfamily), at 95,902 to 98,475 11101 mRNA_2734: 11102 - K14779 DDX52, ROK1 ATP-dependent RNA helicase DDX52/ROK1, at 98,768 to 101,128 11102 mRNA_2735: 11103 - K02257 COX10 protoheme IX farnesyltransferase, at 101,262 to 102,881 11103 mRNA_2736: 11104 - K11093 SNRP70 U1 small nuclear ribonucleoprotein 70kDa, at 103,067 to 104,847 11104
Group Condition mRNA_2732 mRNA_2733 mRNA_2734 mRNA_2735 mRNA_2736
11100 11101 11102 11103 11104
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.1 -0.2 N.D. N.D. N.D.
growth on ypd YPD -0.2 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.0 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.3 -0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.2 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.2 N.D. N.D. N.D.
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