Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11101 and 11102 are separated by 292 nucleotides11102 and 11103 are separated by 133 nucleotides11103 and 11104 are separated by 185 nucleotides11104 and 11105 are separated by 280 nucleotides mRNA_2733: 11101 - KOG0254 Predicted transporter (major facilitator superfamily), at 95,902 to 98,475 11101 mRNA_2734: 11102 - K14779 DDX52, ROK1 ATP-dependent RNA helicase DDX52/ROK1, at 98,768 to 101,128 11102 mRNA_2735: 11103 - K02257 COX10 protoheme IX farnesyltransferase, at 101,262 to 102,881 11103 mRNA_2736: 11104 - K11093 SNRP70 U1 small nuclear ribonucleoprotein 70kDa, at 103,067 to 104,847 11104 mRNA_2737: 11105 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 105,128 to 106,332 11105
Group Condition mRNA_2733 mRNA_2734 mRNA_2735 mRNA_2736 mRNA_2737
11101 11102 11103 11104 11105
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. N.D. -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. N.D. N.D. -0.5
growth on ricinoleic acid YNB Glucose -0.0 N.D. N.D. N.D. -0.3
auxotrophy Dropout Complete -0.2 N.D. N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. N.D. N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. N.D. N.D. -0.1
growth on oleic acid YNB Glucose -0.0 N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. N.D. N.D. -0.1
growth on ypd YPD +0.0 N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose +0.1 N.D. N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. N.D. +0.6
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