Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11102 and 11103 are separated by 133 nucleotides11103 and 11104 are separated by 185 nucleotides11104 and 11105 are separated by 280 nucleotides11105 and 11106 are separated by 1389 nucleotides mRNA_2734: 11102 - K14779 DDX52, ROK1 ATP-dependent RNA helicase DDX52/ROK1, at 98,768 to 101,128 11102 mRNA_2735: 11103 - K02257 COX10 protoheme IX farnesyltransferase, at 101,262 to 102,881 11103 mRNA_2736: 11104 - K11093 SNRP70 U1 small nuclear ribonucleoprotein 70kDa, at 103,067 to 104,847 11104 mRNA_2737: 11105 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 105,128 to 106,332 11105 mRNA_2738: 11106 - K20121 FNBP1 formin-binding protein 1, at 107,722 to 109,356 11106
Group Condition mRNA_2734 mRNA_2735 mRNA_2736 mRNA_2737 mRNA_2738
11102 11103 11104 11105 11106
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -0.9 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.6 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.5 +0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.2 -0.2
growth on ypd YPD N.D. N.D. N.D. -0.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. -0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.0 +0.2
growth on oleic acid YNB Glucose N.D. N.D. N.D. -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.1 +0.1
auxotrophy Dropout Complete N.D. N.D. N.D. -0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. -0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. +0.4 -0.1
auxotrophy YNB Glucose N.D. N.D. N.D. -0.0 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. +0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -0.1 +0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. +0.6 -0.0
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