Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11103 and 11104 are separated by 185 nucleotides11104 and 11105 are separated by 280 nucleotides11105 and 11106 are separated by 1389 nucleotides11106 and 11107 are separated by 418 nucleotides mRNA_2735: 11103 - K02257 COX10 protoheme IX farnesyltransferase, at 101,262 to 102,881 11103 mRNA_2736: 11104 - K11093 SNRP70 U1 small nuclear ribonucleoprotein 70kDa, at 103,067 to 104,847 11104 mRNA_2737: 11105 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 105,128 to 106,332 11105 mRNA_2738: 11106 - K20121 FNBP1 formin-binding protein 1, at 107,722 to 109,356 11106 mRNA_2739: 11107 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 109,775 to 112,160 11107
Group Condition mRNA_2735 mRNA_2736 mRNA_2737 mRNA_2738 mRNA_2739
11103 11104 11105 11106 11107
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.6 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.4 -0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.9 +0.2 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.2 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.5 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.2 -0.3
growth on ypd YPD N.D. N.D. -0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.1 -0.3
growth on oleic acid YNB Glucose N.D. N.D. -0.1 +0.3 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.3 +0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.6 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 -0.2 +0.2
auxotrophy Dropout Complete N.D. N.D. -0.1 +0.3 +0.1
auxotrophy YNB Glucose N.D. N.D. -0.0 +0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 +0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.4 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.0 +0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.1 +0.5 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.0 +0.3 +0.1
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