Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11106 and 11107 are separated by 418 nucleotides11107 and 11108 are separated by 892 nucleotides11108 and 11109 are separated by 326 nucleotides11109 and 11110 are separated by 191 nucleotides mRNA_2738: 11106 - K20121 FNBP1 formin-binding protein 1, at 107,722 to 109,356 11106 mRNA_2739: 11107 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 109,775 to 112,160 11107 mRNA_2740: 11108 - HMMPfam-SUR7/PalI family-PF06687, at 113,053 to 114,206 11108 mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114,533 to 117,473 11109 mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117,665 to 118,794 11110
Group Condition mRNA_2738 mRNA_2739 mRNA_2740 mRNA_2741 mRNA_2742
11106 11107 11108 11109 11110
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 -0.7 -2.5 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.1 -0.5 -2.8 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 +0.7 -3.0 +0.2
growth on ypd YPD +0.1 -0.1 -1.0 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 +0.4 -0.9 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.0 +0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 -0.2 +0.5 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 -0.2 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 -0.1 +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.2 -0.6 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 +0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 -0.2 +0.8 -0.2
growth on oleic acid YNB Glucose +0.3 -0.2 -0.5 +0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -0.8 +1.3 +0.0
auxotrophy YNB Glucose +0.4 -0.0 -0.5 +0.2 +0.4
growth on ricinoleic acid YNB Glucose +0.3 +0.0 -0.2 +0.3 +0.1
auxotrophy Dropout Complete +0.3 +0.1 -0.6 +0.6 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.1 -0.6 +0.6 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 -0.6 +0.8 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 -0.2 +1.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 -0.9 +1.8 +0.1
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