Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11108 and 11109 are separated by 326 nucleotides11109 and 11110 are separated by 191 nucleotides11110 and 11111 are separated by 214 nucleotides11111 and 11112 are separated by 431 nucleotides mRNA_2740: 11108 - HMMPfam-SUR7/PalI family-PF06687, at 113,053 to 114,206 11108 mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114,533 to 117,473 11109 mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117,665 to 118,794 11110 mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119,009 to 120,330 11111 mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120,762 to 122,799 11112
Group Condition mRNA_2740 mRNA_2741 mRNA_2742 mRNA_2743 mRNA_2744
11108 11109 11110 11111 11112
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -2.8 -0.1 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -2.5 +0.3 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -3.0 +0.2 -0.1 +0.6
growth on ypd YPD -1.0 -0.2 +0.0 -0.0 -0.1
auxotrophy YNB Glucose -0.5 +0.2 +0.4 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.9 +0.0 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 -0.1 -0.2 +0.1
growth on oleic acid YNB Glucose -0.5 +0.2 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.3 +0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.5 -0.4 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 -0.3 -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.6 +0.6 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.6 +0.3 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.1 -0.3 +0.0
auxotrophy Dropout Complete -0.6 +0.6 +0.3 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.8 +0.2 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.4 -0.1 -0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +1.2 +0.0 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.8 -0.2 -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 +1.8 +0.1 -0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.8 +1.3 +0.0 +0.0 +0.1
remove
mRNA_2740
plot
remove
mRNA_2741
plot
remove
mRNA_2742
remove
mRNA_2743
plot
remove
mRNA_2744
plot