Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11109 and 11110 are separated by 191 nucleotides11110 and 11111 are separated by 214 nucleotides11111 and 11112 are separated by 431 nucleotides11112 and 11113 are separated by 949 nucleotides mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114,533 to 117,473 11109 mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117,665 to 118,794 11110 mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119,009 to 120,330 11111 mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120,762 to 122,799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123,749 to 127,463 11113
Group Condition mRNA_2741 mRNA_2742 mRNA_2743 mRNA_2744 mRNA_2745
11109 11110 11111 11112 11113
facs on lipid accumulation Sorted High BODIPY Gate -2.8 -0.1 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -2.5 +0.3 -0.1 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -3.0 +0.2 -0.1 +0.6 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.9 +0.0 -0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 -0.2 +0.1 -0.1
growth on ypd YPD -0.2 +0.0 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.3 +0.1 -0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.4 -0.2 +0.1 -0.2
auxotrophy YNB Glucose +0.2 +0.4 -0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 -0.1 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.6 +0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.3 +0.0 +0.1
growth on oleic acid YNB Glucose +0.2 +0.2 -0.2 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.3 -0.1 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.1 -0.0 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 +0.0 -0.3 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.8 +0.2 -0.2 -0.1 -0.1
auxotrophy Dropout Complete +0.6 +0.3 +0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 -0.2 -0.1 +0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +1.8 +0.1 -0.2 -0.2 -0.2
growth on oleic acid YNB Oleic Acid +1.3 +0.0 +0.0 +0.1 +0.2
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